WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1054.2.1 Sequence Name  D1054.2.1
Length (nt)  842   Chromosome Location  V: 10770368-10771351
Chromosome . Primary Identifier  V Chromosome Location . Start  10770368
Chromosome Location . End  10771351 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1054.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003923 pas-2 D1054.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1054.2 D1054.2 696   V: 10770381-10770418

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1054.2.1 10770368 10771351 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196566   51   V: 10770368-10770418 Caenorhabditis elegans
Exon196567   77   V: 10770464-10770540 Caenorhabditis elegans
Exon196568   247   V: 10770594-10770840 Caenorhabditis elegans
Exon196569   467   V: 10770885-10771351 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1054.2.1 10770368 10771351 1

1 Sequence

Length
842

1 Sequence Ontology Term

Identifier Name Description
transcript