WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D1054.14 Sequence Name  D1054.14
Length (nt)  963   Chromosome Location  V: 10804842-10804966
Chromosome . Primary Identifier  V Chromosome Location . Start  10804842
Chromosome Location . End  10804966
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1054.14

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05532 PRP-38 38.2 320 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00043389
WBRNAi00080052
WBRNAi00085379
WBRNAi00008571
WBRNAi00077945
WBRNAi00071563
WBRNAi00066148
WBRNAi00007773
WBRNAi00024936
WBRNAi00080053
WBRNAi00030344
WBRNAi00106646
WBRNAi00106831
WBRNAi00080140
WBRNAi00107035
WBRNAi00107047
WBRNAi00111049
WBRNAi00110814

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D1054.14 10804842 10804966 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008380 prp-38 D1054.14 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:D1054.14 10804842 10804966 -1
CDS:D1054.14 10805152 10805859 -1
CDS:D1054.14 10805905 10806034 -1

1 Sequence

Length
963

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D1054.14.1 D1054.14.1 1084   V: 10804721-10806034