WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C29A12.3a Sequence Name  C29A12.3a
Length (nt)  2322   Chromosome Location  V: 10814113-10814165
Chromosome . Primary Identifier  V Chromosome Location . Start  10814113
Chromosome Location . End  10814165
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29A12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37480 LIG-1, isoform a 86.3 773 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00110405
WBRNAi00110407
WBRNAi00041439
WBRNAi00071564
WBRNAi00007593
WBRNAi00024665
WBRNAi00008458
WBRNAi00078459
WBRNAi00078941
WBRNAi00110406

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C29A12.3a 10814113 10814165 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002985 lig-1 C29A12.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C29A12.3a 10814113 10814165 1
CDS:C29A12.3a 10814212 10814419 1
CDS:C29A12.3a 10814466 10814890 1
CDS:C29A12.3a 10814937 10816299 1
CDS:C29A12.3a 10816351 10816623 1

1 Sequence

Length
2322

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C29A12.3a.1 C29A12.3a.1 2417   V: 10814113-10816718