WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29A12.4b.1 Sequence Name  C29A12.4b.1
Length (nt)  5439   Chromosome Location  V: 10825014-10846699
Chromosome . Primary Identifier  V Chromosome Location . Start  10825014
Chromosome Location . End  10846699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29A12.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007799 nrx-1 C29A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29A12.4b C29A12.4b 5151   V: 10825024-10825142

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C29A12.4b.1 10825014 10846699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196755   129   V: 10825014-10825142 Caenorhabditis elegans
Exon196759   156   V: 10825194-10825349 Caenorhabditis elegans
Exon196763   64   V: 10825688-10825751 Caenorhabditis elegans
Exon196768   168   V: 10826116-10826283 Caenorhabditis elegans
Exon196772   100   V: 10826327-10826426 Caenorhabditis elegans
Exon196776   74   V: 10826873-10826946 Caenorhabditis elegans
Exon196780   115   V: 10827013-10827127 Caenorhabditis elegans
Exon196784   161   V: 10827256-10827416 Caenorhabditis elegans
Exon196789   159   V: 10827744-10827902 Caenorhabditis elegans
Exon196795   358   V: 10828517-10828874 Caenorhabditis elegans
Exon196799   597   V: 10828961-10829557 Caenorhabditis elegans
Exon196803   98   V: 10829603-10829700 Caenorhabditis elegans
Exon196807   120   V: 10829746-10829865 Caenorhabditis elegans
Exon196811   109   V: 10829916-10830024 Caenorhabditis elegans
Exon196815   211   V: 10830072-10830282 Caenorhabditis elegans
Exon196819   198   V: 10830335-10830532 Caenorhabditis elegans
Exon196823   356   V: 10830574-10830929 Caenorhabditis elegans
Exon196827   120   V: 10831171-10831290 Caenorhabditis elegans
Exon196831   436   V: 10831717-10832152 Caenorhabditis elegans
Exon196835   104   V: 10832245-10832348 Caenorhabditis elegans
Exon196843   122   V: 10835531-10835652 Caenorhabditis elegans
Exon196849   94   V: 10838067-10838160 Caenorhabditis elegans
Exon196864   60   V: 10842434-10842493 Caenorhabditis elegans
Exon196873   528   V: 10842992-10843519 Caenorhabditis elegans
Exon196880   140   V: 10845645-10845784 Caenorhabditis elegans
Exon196891   138   V: 10845838-10845975 Caenorhabditis elegans
Exon196902   111   V: 10846086-10846196 Caenorhabditis elegans
Exon196920   413   V: 10846287-10846699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C29A12.4b.1 10825014 10846699 1

1 Sequence

Length
5439

1 Sequence Ontology Term

Identifier Name Description
transcript