WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29A12.4b.1 Sequence Name  C29A12.4b.1
Length (nt)  5439   Chromosome Location  V: 10825014-10846699
Chromosome . Primary Identifier  V Chromosome Location . Start  10825014
Chromosome Location . End  10846699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29A12.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007799 nrx-1 C29A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29A12.4b C29A12.4b 5151   V: 10825024-10825142

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C29A12.4b.1 10825014 10846699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196810   129   V: 10825014-10825142 Caenorhabditis elegans
Exon196814   156   V: 10825194-10825349 Caenorhabditis elegans
Exon196818   64   V: 10825688-10825751 Caenorhabditis elegans
Exon196823   168   V: 10826116-10826283 Caenorhabditis elegans
Exon196827   100   V: 10826327-10826426 Caenorhabditis elegans
Exon196831   74   V: 10826873-10826946 Caenorhabditis elegans
Exon196835   115   V: 10827013-10827127 Caenorhabditis elegans
Exon196839   161   V: 10827256-10827416 Caenorhabditis elegans
Exon196844   159   V: 10827744-10827902 Caenorhabditis elegans
Exon196850   358   V: 10828517-10828874 Caenorhabditis elegans
Exon196854   597   V: 10828961-10829557 Caenorhabditis elegans
Exon196858   98   V: 10829603-10829700 Caenorhabditis elegans
Exon196862   120   V: 10829746-10829865 Caenorhabditis elegans
Exon196866   109   V: 10829916-10830024 Caenorhabditis elegans
Exon196870   211   V: 10830072-10830282 Caenorhabditis elegans
Exon196874   198   V: 10830335-10830532 Caenorhabditis elegans
Exon196878   356   V: 10830574-10830929 Caenorhabditis elegans
Exon196882   120   V: 10831171-10831290 Caenorhabditis elegans
Exon196886   436   V: 10831717-10832152 Caenorhabditis elegans
Exon196890   104   V: 10832245-10832348 Caenorhabditis elegans
Exon196898   122   V: 10835531-10835652 Caenorhabditis elegans
Exon196904   94   V: 10838067-10838160 Caenorhabditis elegans
Exon196919   60   V: 10842434-10842493 Caenorhabditis elegans
Exon196928   528   V: 10842992-10843519 Caenorhabditis elegans
Exon196935   140   V: 10845645-10845784 Caenorhabditis elegans
Exon196946   138   V: 10845838-10845975 Caenorhabditis elegans
Exon196957   111   V: 10846086-10846196 Caenorhabditis elegans
Exon196975   413   V: 10846287-10846699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C29A12.4b.1 10825014 10846699 1

1 Sequence

Length
5439

1 Sequence Ontology Term

Identifier Name Description
transcript