WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29A12.4l.1 Sequence Name  C29A12.4l.1
Length (nt)  4650   Chromosome Location  V: 10825024-10846421
Chromosome . Primary Identifier  V Chromosome Location . Start  10825024
Chromosome Location . End  10846421 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29A12.4l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007799 nrx-1 C29A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29A12.4l C29A12.4l 4650   V: 10825024-10825142

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29A12.4l.1 10825024 10846421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196812   119   V: 10825024-10825142 Caenorhabditis elegans
Exon196816   156   V: 10825194-10825349 Caenorhabditis elegans
Exon196820   64   V: 10825688-10825751 Caenorhabditis elegans
Exon196825   168   V: 10826116-10826283 Caenorhabditis elegans
Exon196829   100   V: 10826327-10826426 Caenorhabditis elegans
Exon196833   74   V: 10826873-10826946 Caenorhabditis elegans
Exon196837   115   V: 10827013-10827127 Caenorhabditis elegans
Exon196841   161   V: 10827256-10827416 Caenorhabditis elegans
Exon196846   159   V: 10827744-10827902 Caenorhabditis elegans
Exon196848   27   V: 10828042-10828068 Caenorhabditis elegans
Exon196852   358   V: 10828517-10828874 Caenorhabditis elegans
Exon196856   597   V: 10828961-10829557 Caenorhabditis elegans
Exon196860   98   V: 10829603-10829700 Caenorhabditis elegans
Exon196864   120   V: 10829746-10829865 Caenorhabditis elegans
Exon196868   109   V: 10829916-10830024 Caenorhabditis elegans
Exon196872   211   V: 10830072-10830282 Caenorhabditis elegans
Exon196876   198   V: 10830335-10830532 Caenorhabditis elegans
Exon196880   356   V: 10830574-10830929 Caenorhabditis elegans
Exon196884   120   V: 10831171-10831290 Caenorhabditis elegans
Exon196888   436   V: 10831717-10832152 Caenorhabditis elegans
Exon196892   104   V: 10832245-10832348 Caenorhabditis elegans
Exon196900   122   V: 10835531-10835652 Caenorhabditis elegans
Exon196908   94   V: 10838067-10838160 Caenorhabditis elegans
Exon196925   60   V: 10842434-10842493 Caenorhabditis elegans
Exon196942   140   V: 10845645-10845784 Caenorhabditis elegans
Exon196954   138   V: 10845838-10845975 Caenorhabditis elegans
Exon196965   111   V: 10846086-10846196 Caenorhabditis elegans
Exon196973   135   V: 10846287-10846421 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29A12.4l.1 10825024 10846421 1

1 Sequence

Length
4650

1 Sequence Ontology Term

Identifier Name Description
transcript