WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29A12.6a.1 Sequence Name  C29A12.6a.1
Length (nt)  2057   Chromosome Location  V: 10847193-10852574
Chromosome . Primary Identifier  V Chromosome Location . Start  10847193
Chromosome Location . End  10852574 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29A12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007800 C29A12.6 C29A12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29A12.6a C29A12.6a 1932   V: 10847193-10847549

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29A12.6a.1 10847193 10852574 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196979   357   V: 10847193-10847549 Caenorhabditis elegans
Exon196980   111   V: 10847604-10847714 Caenorhabditis elegans
Exon196982   97   V: 10847762-10847858 Caenorhabditis elegans
Exon196984   550   V: 10847914-10848463 Caenorhabditis elegans
Exon197002   327   V: 10851440-10851766 Caenorhabditis elegans
Exon197004   147   V: 10851811-10851957 Caenorhabditis elegans
Exon197006   274   V: 10852007-10852280 Caenorhabditis elegans
Exon197009   194   V: 10852381-10852574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29A12.6a.1 10847193 10852574 1

1 Sequence

Length
2057

1 Sequence Ontology Term

Identifier Name Description
transcript