WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H10.2c.1 Sequence Name  F53H10.2c.1
Length (nt)  1743   Chromosome Location  V: 10852883-10855241
Chromosome . Primary Identifier  V Chromosome Location . Start  10852883
Chromosome Location . End  10855241 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H10.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010012 saeg-1 F53H10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H10.2c F53H10.2c 1743   V: 10852883-10852966

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H10.2c.1 10852883 10855241 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196957   84   V: 10852883-10852966 Caenorhabditis elegans
Exon196961   586   V: 10853192-10853777 Caenorhabditis elegans
Exon196965   263   V: 10853833-10854095 Caenorhabditis elegans
Exon196969   272   V: 10854146-10854417 Caenorhabditis elegans
Exon196973   146   V: 10854485-10854630 Caenorhabditis elegans
Exon196977   323   V: 10854802-10855124 Caenorhabditis elegans
Exon196979   69   V: 10855173-10855241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H10.2c.1 10852883 10855241 -1

1 Sequence

Length
1743

1 Sequence Ontology Term

Identifier Name Description
transcript