WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H10.2a.1 Sequence Name  F53H10.2a.1
Length (nt)  3067   Chromosome Location  V: 10852519-10865699
Chromosome . Primary Identifier  V Chromosome Location . Start  10852519
Chromosome Location . End  10865699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010012 saeg-1 F53H10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H10.2a F53H10.2a 2703   V: 10852883-10852966

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H10.2a.1 10852519 10865699 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197011   448   V: 10852519-10852966 Caenorhabditis elegans
Exon197014   586   V: 10853192-10853777 Caenorhabditis elegans
Exon197018   263   V: 10853833-10854095 Caenorhabditis elegans
Exon197022   272   V: 10854146-10854417 Caenorhabditis elegans
Exon197026   146   V: 10854485-10854630 Caenorhabditis elegans
Exon197030   323   V: 10854802-10855124 Caenorhabditis elegans
Exon197035   160   V: 10855173-10855332 Caenorhabditis elegans
Exon197038   140   V: 10859642-10859781 Caenorhabditis elegans
Exon197043   79   V: 10860802-10860880 Caenorhabditis elegans
Exon197045   92   V: 10864270-10864361 Caenorhabditis elegans
Exon197046   105   V: 10864418-10864522 Caenorhabditis elegans
Exon197047   150   V: 10864569-10864718 Caenorhabditis elegans
Exon197048   81   V: 10864765-10864845 Caenorhabditis elegans
Exon197049   105   V: 10865328-10865432 Caenorhabditis elegans
Exon197050   117   V: 10865583-10865699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H10.2a.1 10852519 10865699 -1

1 Sequence

Length
3067

1 Sequence Ontology Term

Identifier Name Description
transcript