WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58B4.1a.1 Sequence Name  F58B4.1a.1
Length (nt)  1913   Chromosome Location  V: 10918857-10921847
Chromosome . Primary Identifier  V Chromosome Location . Start  10918857
Chromosome Location . End  10921847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58B4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003549 nas-31 F58B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58B4.1a F58B4.1a 1737   V: 10918942-10919065

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58B4.1a.1 10918857 10921847 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197132   209   V: 10918857-10919065 Caenorhabditis elegans
Exon197133   192   V: 10919364-10919555 Caenorhabditis elegans
Exon197135   242   V: 10919770-10920011 Caenorhabditis elegans
Exon197137   116   V: 10920059-10920174 Caenorhabditis elegans
Exon197139   223   V: 10920216-10920438 Caenorhabditis elegans
Exon197141   105   V: 10920492-10920596 Caenorhabditis elegans
Exon197143   101   V: 10920642-10920742 Caenorhabditis elegans
Exon197145   84   V: 10920790-10920873 Caenorhabditis elegans
Exon197147   65   V: 10920956-10921020 Caenorhabditis elegans
Exon197149   81   V: 10921125-10921205 Caenorhabditis elegans
Exon197151   122   V: 10921253-10921374 Caenorhabditis elegans
Exon197153   141   V: 10921422-10921562 Caenorhabditis elegans
Exon197156   232   V: 10921616-10921847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58B4.1a.1 10918857 10921847 -1

1 Sequence

Length
1913

1 Sequence Ontology Term

Identifier Name Description
transcript