WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F17C11.7a Sequence Name  F17C11.7a
Length (nt)  1596   Chromosome Location  V: 10957085-10957466
Chromosome . Primary Identifier  V Chromosome Location . Start  10957085
Chromosome Location . End  10957466
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17C11.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05654 PIGT-1, isoform a 60.1 531 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00044879
WBRNAi00013461
WBRNAi00031068
WBRNAi00111239
WBRNAi00062017
WBRNAi00025124
WBRNAi00027284

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F17C11.7a 10957085 10957466 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008918 pigt-1 F17C11.7 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F17C11.7a 10957085 10957466 -1
CDS:F17C11.7a 10957513 10958165 -1
CDS:F17C11.7a 10958213 10958613 -1
CDS:F17C11.7a 10958660 10958819 -1

1 Sequence

Length
1596

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F17C11.7a.1 F17C11.7a.1 1684   V: 10956999-10958821