WormMine: Gene WBGene00200280

• WormBase Gene ID: WBGene00200280
• Gene Name: F53B7.12
• Sequence Name: F53B7.12
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by pmt-2 and camt-1 based on microarray and RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 179

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00200280

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F53B7.12	F53B7.12	179	V: 10984710-10984888

Other

0 CDSs

0 RNAi Result

9 Allele

• gk963301
• gk964451
• gk964452
• gk864617
• gk816421
• gk964093
• gk246565
• WBVar00003235
• WBVar01743268

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00200280
• Start: 10984710
• End: 10984888
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_10983314..10984709
• Length (nt): 1396
• Chromosome Location: V: 10983314-10984709
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in pmt-2(RNAi) animals comparing to control animals iinjected with empty vector.	Fold-change > 1.5, ANOVA P values < 0.05.	WBPaper00055482:pmt-2(RNAi)_downregulated
	Transcripts that showed significantly altered expression at AFD neurons in camt-1(ok515) animals comparing to in wild type AX1888-1 strain.	RNA-seq data were mapped using PRAGUI - a Python 3-based pipeline for RNA-seq data analysis.	WBPaper00061902:camt-1(ok515)_regulated_AFD

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00200280
• Start: 10984710
• End: 10984888
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 179

1 Sequence Ontology Term