WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B7.3.1 Sequence Name  F53B7.3.1
Length (nt)  881   Chromosome Location  V: 10999663-11000699
Chromosome . Primary Identifier  V Chromosome Location . Start  10999663
Chromosome Location . End  11000699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009966 isy-1 F53B7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B7.3 F53B7.3 804   V: 10999721-11000222

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53B7.3.1 10999663 11000699 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197369   560   V: 10999663-11000222 Caenorhabditis elegans
Exon197370   155   V: 11000270-11000424 Caenorhabditis elegans
Exon197371   75   V: 11000468-11000542 Caenorhabditis elegans
Exon197372   91   V: 11000609-11000699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53B7.3.1 10999663 11000699 -1

1 Sequence

Length
881

1 Sequence Ontology Term

Identifier Name Description
transcript