WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B7.2b.1 Sequence Name  F53B7.2b.1
Length (nt)  1739   Chromosome Location  V: 10992089-10994974
Chromosome . Primary Identifier  V Chromosome Location . Start  10992089
Chromosome Location . End  10994974 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B7.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009965 frpr-9 F53B7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B7.2b F53B7.2b 1572   V: 10992099-10992198

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53B7.2b.1 10992089 10994974 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197400   110   V: 10992089-10992198 Caenorhabditis elegans
Exon197403   101   V: 10992247-10992347 Caenorhabditis elegans
Exon197405   265   V: 10992400-10992664 Caenorhabditis elegans
Exon197407   283   V: 10992706-10992988 Caenorhabditis elegans
Exon197410   81   V: 10993355-10993435 Caenorhabditis elegans
Exon197412   205   V: 10993600-10993804 Caenorhabditis elegans
Exon197414   192   V: 10993895-10994086 Caenorhabditis elegans
Exon197416   79   V: 10994131-10994209 Caenorhabditis elegans
Exon197418   207   V: 10994258-10994464 Caenorhabditis elegans
Exon197420   216   V: 10994759-10994974 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53B7.2b.1 10992089 10994974 1

1 Sequence

Length
1739

1 Sequence Ontology Term

Identifier Name Description
transcript