WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B7.2a.1 Sequence Name  F53B7.2a.1
Length (nt)  1754   Chromosome Location  V: 10992098-10994971
Chromosome . Primary Identifier  V Chromosome Location . Start  10992098
Chromosome Location . End  10994971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009965 frpr-9 F53B7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B7.2a F53B7.2a 1599   V: 10992099-10992198

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53B7.2a.1 10992098 10994971 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197401   101   V: 10992098-10992198 Caenorhabditis elegans
Exon197402   101   V: 10992247-10992347 Caenorhabditis elegans
Exon197404   265   V: 10992400-10992664 Caenorhabditis elegans
Exon197406   283   V: 10992706-10992988 Caenorhabditis elegans
Exon197408   27   V: 10993186-10993212 Caenorhabditis elegans
Exon197409   81   V: 10993355-10993435 Caenorhabditis elegans
Exon197411   205   V: 10993600-10993804 Caenorhabditis elegans
Exon197413   192   V: 10993895-10994086 Caenorhabditis elegans
Exon197415   79   V: 10994131-10994209 Caenorhabditis elegans
Exon197417   207   V: 10994258-10994464 Caenorhabditis elegans
Exon197419   213   V: 10994759-10994971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53B7.2a.1 10992098 10994971 1

1 Sequence

Length
1754

1 Sequence Ontology Term

Identifier Name Description
transcript