WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B11.1b.1 Sequence Name  C45B11.1b.1
Length (nt)  1884   Chromosome Location  V: 11036461-11039429
Chromosome . Primary Identifier  V Chromosome Location . Start  11036461
Chromosome Location . End  11039429 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006443 pak-2 C45B11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B11.1b C45B11.1b 1563   V: 11036754-11036972

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B11.1b.1 11036461 11039429 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197506   512   V: 11036461-11036972 Caenorhabditis elegans
Exon197509   304   V: 11037487-11037790 Caenorhabditis elegans
Exon197511   407   V: 11037835-11038241 Caenorhabditis elegans
Exon197512   382   V: 11038599-11038980 Caenorhabditis elegans
Exon197515   125   V: 11039028-11039152 Caenorhabditis elegans
Exon197517   154   V: 11039276-11039429 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B11.1b.1 11036461 11039429 -1

1 Sequence

Length
1884

1 Sequence Ontology Term

Identifier Name Description
transcript