WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H19N07.2m.1 Sequence Name  H19N07.2m.1
Length (nt)  4204   Chromosome Location  V: 11113907-11118815
Chromosome . Primary Identifier  V Chromosome Location . Start  11113907
Chromosome Location . End  11118815 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H19N07.2m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010406 math-33 H19N07.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H19N07.2m H19N07.2m 3405   V: 11114044-11114255

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H19N07.2m.1 11113907 11118815 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197645   349   V: 11113907-11114255 Caenorhabditis elegans
Exon197665   345   V: 11114301-11114645 Caenorhabditis elegans
Exon197689   467   V: 11114788-11115254 Caenorhabditis elegans
Exon197705   962   V: 11115421-11116382 Caenorhabditis elegans
Exon197721   118   V: 11116427-11116544 Caenorhabditis elegans
Exon197737   793   V: 11116589-11117381 Caenorhabditis elegans
Exon197747   106   V: 11117431-11117536 Caenorhabditis elegans
Exon197769   243   V: 11117602-11117844 Caenorhabditis elegans
Exon197779   79   V: 11117886-11117964 Caenorhabditis elegans
Exon197792   742   V: 11118074-11118815 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H19N07.2m.1 11113907 11118815 1

1 Sequence

Length
4204

1 Sequence Ontology Term

Identifier Name Description
transcript