WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H19N07.2c.1 Sequence Name  H19N07.2c.1
Length (nt)  4215   Chromosome Location  V: 11113907-11118823
Chromosome . Primary Identifier  V Chromosome Location . Start  11113907
Chromosome Location . End  11118823 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H19N07.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010406 math-33 H19N07.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H19N07.2c H19N07.2c 3408   V: 11114044-11114255

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H19N07.2c.1 11113907 11118823 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197667   349   V: 11113907-11114255 Caenorhabditis elegans
Exon197692   336   V: 11114310-11114645 Caenorhabditis elegans
Exon197700   467   V: 11114788-11115254 Caenorhabditis elegans
Exon197716   962   V: 11115421-11116382 Caenorhabditis elegans
Exon197732   118   V: 11116427-11116544 Caenorhabditis elegans
Exon197748   793   V: 11116589-11117381 Caenorhabditis elegans
Exon197771   115   V: 11117431-11117545 Caenorhabditis elegans
Exon197780   246   V: 11117599-11117844 Caenorhabditis elegans
Exon197794   79   V: 11117886-11117964 Caenorhabditis elegans
Exon197822   750   V: 11118074-11118823 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H19N07.2c.1 11113907 11118823 1

1 Sequence

Length
4215

1 Sequence Ontology Term

Identifier Name Description
transcript