WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H19N07.2k.1 Sequence Name  H19N07.2k.1
Length (nt)  4220   Chromosome Location  V: 11113912-11118824
Chromosome . Primary Identifier  V Chromosome Location . Start  11113912
Chromosome Location . End  11118824 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H19N07.2k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010406 math-33 H19N07.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H19N07.2k H19N07.2k 3417   V: 11114044-11114255

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H19N07.2k.1 11113912 11118824 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197657   344   V: 11113912-11114255 Caenorhabditis elegans
Exon197663   345   V: 11114301-11114645 Caenorhabditis elegans
Exon197687   467   V: 11114788-11115254 Caenorhabditis elegans
Exon197703   962   V: 11115421-11116382 Caenorhabditis elegans
Exon197719   118   V: 11116427-11116544 Caenorhabditis elegans
Exon197735   793   V: 11116589-11117381 Caenorhabditis elegans
Exon197754   115   V: 11117431-11117545 Caenorhabditis elegans
Exon197763   246   V: 11117599-11117844 Caenorhabditis elegans
Exon197777   79   V: 11117886-11117964 Caenorhabditis elegans
Exon197804   751   V: 11118074-11118824 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H19N07.2k.1 11113912 11118824 1

1 Sequence

Length
4220

1 Sequence Ontology Term

Identifier Name Description
transcript