WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H19N07.2d.1 Sequence Name  H19N07.2d.1
Length (nt)  4203   Chromosome Location  V: 11113907-11118820
Chromosome . Primary Identifier  V Chromosome Location . Start  11113907
Chromosome Location . End  11118820 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H19N07.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010406 math-33 H19N07.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H19N07.2d H19N07.2d 3399   V: 11114044-11114255

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H19N07.2d.1 11113907 11118820 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197702   349   V: 11113907-11114255 Caenorhabditis elegans
Exon197727   336   V: 11114310-11114645 Caenorhabditis elegans
Exon197735   467   V: 11114788-11115254 Caenorhabditis elegans
Exon197751   962   V: 11115421-11116382 Caenorhabditis elegans
Exon197767   118   V: 11116427-11116544 Caenorhabditis elegans
Exon197783   793   V: 11116589-11117381 Caenorhabditis elegans
Exon197797   106   V: 11117431-11117536 Caenorhabditis elegans
Exon197815   246   V: 11117599-11117844 Caenorhabditis elegans
Exon197829   79   V: 11117886-11117964 Caenorhabditis elegans
Exon197849   747   V: 11118074-11118820 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H19N07.2d.1 11113907 11118820 1

1 Sequence

Length
4203

1 Sequence Ontology Term

Identifier Name Description
transcript