WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C06H2.5a Sequence Name  C06H2.5a
Length (nt)  633   Chromosome Location  V: 11138954-11139060
Chromosome . Primary Identifier  V Chromosome Location . Start  11138954
Chromosome Location . End  11139060
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06H2.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43048 GLB-3, isoform a 23.5 210 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00039954
WBRNAi00010352
WBRNAi00028607

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C06H2.5a 11138954 11139060 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007389 glb-3 C06H2.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C06H2.5a 11138954 11139060 1
CDS:C06H2.5a 11139346 11139682 1
CDS:C06H2.5a 11139727 11139901 1
CDS:C06H2.5a 11140310 11140323 1

1 Sequence

Length
633

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06H2.5a.1 C06H2.5a.1 1353   V: 11134596-11140814
Transcript:C06H2.5a.2 C06H2.5a.2 1271   V: 11138507-11140814