WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19C4.8.1 Sequence Name  T19C4.8.1
Length (nt)  1163   Chromosome Location  V: 11152333-11155653
Chromosome . Primary Identifier  V Chromosome Location . Start  11152333
Chromosome Location . End  11155653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19C4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005195 srg-38 T19C4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19C4.8 T19C4.8 921   V: 11152575-11152676

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19C4.8.1 11152333 11155653 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197954   344   V: 11152333-11152676 Caenorhabditis elegans
Exon197955   188   V: 11153118-11153305 Caenorhabditis elegans
Exon197956   124   V: 11153357-11153480 Caenorhabditis elegans
Exon197957   138   V: 11153527-11153664 Caenorhabditis elegans
Exon197958   369   V: 11155285-11155653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19C4.8.1 11152333 11155653 -1

1 Sequence

Length
1163

1 Sequence Ontology Term

Identifier Name Description
transcript