WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19C4.6a.1 Sequence Name  T19C4.6a.1
Length (nt)  1326   Chromosome Location  V: 11174433-11177677
Chromosome . Primary Identifier  V Chromosome Location . Start  11174433
Chromosome Location . End  11177677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19C4.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001663 gpa-1 T19C4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19C4.6a T19C4.6a 1074   V: 11174567-11174757

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19C4.6a.1 11174433 11177677 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197943   325   V: 11174433-11174757 Caenorhabditis elegans
Exon197947   160   V: 11174930-11175089 Caenorhabditis elegans
Exon197949   259   V: 11175145-11175403 Caenorhabditis elegans
Exon197953   87   V: 11175938-11176024 Caenorhabditis elegans
Exon197955   74   V: 11176152-11176225 Caenorhabditis elegans
Exon197957   142   V: 11176269-11176410 Caenorhabditis elegans
Exon197960   43   V: 11176681-11176723 Caenorhabditis elegans
Exon197963   236   V: 11177442-11177677 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19C4.6a.1 11174433 11177677 -1

1 Sequence

Length
1326

1 Sequence Ontology Term

Identifier Name Description
transcript