WormMine: Gene WBGene00045170

• WormBase Gene ID: WBGene00045170
• Gene Name: T19C4.12
• Sequence Name: T19C4.12
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by several genes including etr-1; sftb-1; and meg-4 based on RNA-seq studies.
• Biotype: SO:0001267
• Genetic Position: :±
• Length (nt): 178

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00045170

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:T19C4.12	T19C4.12	178	V: 11175529-11175706

Other

0 CDSs

2 RNAi Result

• WBRNAi00018833
• WBRNAi00027599

6 Allele

• gk963271
• gk963301
• gk964451
• gk964452
• gk645396
• pk15

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00045170
• Start: 11175529
• End: 11175706
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts of noncoding genes that showed significantly increased expression in muscle.	DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed.	WBPaper00062325:muscle_enriched_noncoding-RNA
	Transcripts that showed significantly increased expression in strain CER276 sftb1(cer39[Q552P, R643C,K718E]) comparing to in N2 animals at L4 larva stage.	DESeq2, fold change > 2	WBPaper00058725:sftb-1(cer39)_upregulated
	Targets of endo-siRNA that showed significantly increased expression in the whole animal of JH3225[meg-3(tm4259) meg-4(ax2026)] comparing to in N2.	DESeq2 1.22.2, fold change > 2, FDR < 0.05	WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_upregulated_endo-siRNA_targets

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00045170
• Start: 11175529
• End: 11175706
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 178

1 Sequence Ontology Term