WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D6.1.1 Sequence Name  K10D6.1.1
Length (nt)  1677   Chromosome Location  V: 11191283-11193639
Chromosome . Primary Identifier  V Chromosome Location . Start  11191283
Chromosome Location . End  11193639 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010741 lgc-49 K10D6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D6.1 K10D6.1 1374   V: 11191283-11191502

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D6.1.1 11191283 11193639 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197976   220   V: 11191283-11191502 Caenorhabditis elegans
Exon197977   80   V: 11191611-11191690 Caenorhabditis elegans
Exon197978   93   V: 11191750-11191842 Caenorhabditis elegans
Exon197979   77   V: 11191895-11191971 Caenorhabditis elegans
Exon197980   49   V: 11192277-11192325 Caenorhabditis elegans
Exon197981   326   V: 11192377-11192702 Caenorhabditis elegans
Exon197982   451   V: 11192751-11193201 Caenorhabditis elegans
Exon197983   381   V: 11193259-11193639 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D6.1.1 11191283 11193639 1

1 Sequence

Length
1677

1 Sequence Ontology Term

Identifier Name Description
transcript