WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19B10.3.1 Sequence Name  T19B10.3.1
Length (nt)  2014   Chromosome Location  V: 11222931-11226018
Chromosome . Primary Identifier  V Chromosome Location . Start  11222931
Chromosome Location . End  11226018 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19B10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011832 bgal-1 T19B10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19B10.3 T19B10.3 1962   V: 11222976-11223401

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19B10.3.1 11222931 11226018 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198076   471   V: 11222931-11223401 Caenorhabditis elegans
Exon198077   219   V: 11223453-11223671 Caenorhabditis elegans
Exon198079   160   V: 11223814-11223973 Caenorhabditis elegans
Exon198081   466   V: 11224018-11224483 Caenorhabditis elegans
Exon198083   200   V: 11224526-11224725 Caenorhabditis elegans
Exon198085   91   V: 11224769-11224859 Caenorhabditis elegans
Exon198087   86   V: 11224908-11224993 Caenorhabditis elegans
Exon198089   204   V: 11225049-11225252 Caenorhabditis elegans
Exon198092   117   V: 11225902-11226018 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19B10.3.1 11222931 11226018 -1

1 Sequence

Length
2014

1 Sequence Ontology Term

Identifier Name Description
transcript