WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03E10.5.1 Sequence Name  C03E10.5.1
Length (nt)  3198   Chromosome Location  V: 11273148-11278161
Chromosome . Primary Identifier  V Chromosome Location . Start  11273148
Chromosome Location . End  11278161 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007282 clec-223 C03E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03E10.5 C03E10.5 3105   V: 11273148-11273304

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03E10.5.1 11273148 11278161 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198239   157   V: 11273148-11273304 Caenorhabditis elegans
Exon198240   117   V: 11273581-11273697 Caenorhabditis elegans
Exon198241   920   V: 11273741-11274660 Caenorhabditis elegans
Exon198242   889   V: 11275010-11275898 Caenorhabditis elegans
Exon198243   131   V: 11275945-11276075 Caenorhabditis elegans
Exon198244   74   V: 11276124-11276197 Caenorhabditis elegans
Exon198245   87   V: 11276416-11276502 Caenorhabditis elegans
Exon198246   164   V: 11276545-11276708 Caenorhabditis elegans
Exon198247   317   V: 11276839-11277155 Caenorhabditis elegans
Exon198248   83   V: 11277205-11277287 Caenorhabditis elegans
Exon198249   259   V: 11277903-11278161 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03E10.5.1 11273148 11278161 1

1 Sequence

Length
3198

1 Sequence Ontology Term

Identifier Name Description
transcript