WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47G9.4.1 Sequence Name  F47G9.4.1
Length (nt)  2684   Chromosome Location  V: 11317213-11321816
Chromosome . Primary Identifier  V Chromosome Location . Start  11317213
Chromosome Location . End  11321816 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47G9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009831 F47G9.4 F47G9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47G9.4 F47G9.4 2469   V: 11317323-11317989

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47G9.4.1 11317213 11321816 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198350   777   V: 11317213-11317989 Caenorhabditis elegans
Exon198351   294   V: 11318096-11318389 Caenorhabditis elegans
Exon198352   243   V: 11318437-11318679 Caenorhabditis elegans
Exon198353   124   V: 11318725-11318848 Caenorhabditis elegans
Exon198354   367   V: 11318901-11319267 Caenorhabditis elegans
Exon198356   540   V: 11320751-11321290 Caenorhabditis elegans
Exon198357   195   V: 11321430-11321624 Caenorhabditis elegans
Exon198358   144   V: 11321673-11321816 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47G9.4.1 11317213 11321816 -1

1 Sequence

Length
2684

1 Sequence Ontology Term

Identifier Name Description
transcript