WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B7.4.1 Sequence Name  F57B7.4.1
Length (nt)  1559   Chromosome Location  V: 11446685-11449249
Chromosome . Primary Identifier  V Chromosome Location . Start  11446685
Chromosome Location . End  11449249 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003248 mig-17 F57B7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B7.4 F57B7.4 1530   V: 11446685-11446739

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B7.4.1 11446685 11449249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198608   55   V: 11446685-11446739 Caenorhabditis elegans
Exon198609   83   V: 11446791-11446873 Caenorhabditis elegans
Exon198611   275   V: 11447494-11447768 Caenorhabditis elegans
Exon198612   252   V: 11447815-11448066 Caenorhabditis elegans
Exon198613   105   V: 11448109-11448213 Caenorhabditis elegans
Exon198614   150   V: 11448323-11448472 Caenorhabditis elegans
Exon198615   310   V: 11448519-11448828 Caenorhabditis elegans
Exon198616   126   V: 11448872-11448997 Caenorhabditis elegans
Exon198617   203   V: 11449047-11449249 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B7.4.1 11446685 11449249 1

1 Sequence

Length
1559

1 Sequence Ontology Term

Identifier Name Description
transcript