WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T11F9.5.1 Sequence Name  T11F9.5.1
Length (nt)  1152   Chromosome Location  V: 11472564-11473899
Chromosome . Primary Identifier  V Chromosome Location . Start  11472564
Chromosome Location . End  11473899 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11F9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003540 nas-21 T11F9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11F9.5 T11F9.5 1143   V: 11472573-11472783

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11F9.5.1 11472564 11473899 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198676   220   V: 11472564-11472783 Caenorhabditis elegans
Exon198677   388   V: 11472826-11473213 Caenorhabditis elegans
Exon198678   185   V: 11473260-11473444 Caenorhabditis elegans
Exon198679   116   V: 11473494-11473609 Caenorhabditis elegans
Exon198680   243   V: 11473657-11473899 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11F9.5.1 11472564 11473899 1

1 Sequence

Length
1152

1 Sequence Ontology Term

Identifier Name Description
transcript