WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:T11F9.18.1 Sequence Name  T11F9.18.1
Length (nt)  1211   Chromosome Location  V: 11485858-11487266
Chromosome . Primary Identifier  V Chromosome Location . Start  11485858
Chromosome Location . End  11487266 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11F9.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005227 srh-1 T11F9.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T11F9.18 T11F9.18 1035   V: 11485858-11486024

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T11F9.18.1 11485858 11487266 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198701   167   V: 11485858-11486024 Caenorhabditis elegans
Exon198702   334   V: 11486079-11486412 Caenorhabditis elegans
Exon198703   319   V: 11486458-11486776 Caenorhabditis elegans
Exon198704   105   V: 11486823-11486927 Caenorhabditis elegans
Exon198706   286   V: 11486981-11487266 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T11F9.18.1 11485858 11487266 1

1 Sequence

Length
1211

1 Sequence Ontology Term

Identifier Name Description
transcript