WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55A6.12a.1 Sequence Name  C55A6.12a.1
Length (nt)  661   Chromosome Location  V: 11501374-11503131
Chromosome . Primary Identifier  V Chromosome Location . Start  11501374
Chromosome Location . End  11503131 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55A6.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044019 C55A6.12 C55A6.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55A6.12a C55A6.12a 585   V: 11501444-11501506

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.12a.1 11501374 11503131 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198736   133   V: 11501374-11501506 Caenorhabditis elegans
Exon198739   283   V: 11501699-11501981 Caenorhabditis elegans
Exon198742   98   V: 11502621-11502718 Caenorhabditis elegans
Exon198743   71   V: 11502939-11503009 Caenorhabditis elegans
Exon198744   76   V: 11503056-11503131 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.12a.1 11501374 11503131 -1

1 Sequence

Length
661

1 Sequence Ontology Term

Identifier Name Description
transcript