WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55A6.10a.1 Sequence Name  C55A6.10a.1
Length (nt)  1851   Chromosome Location  V: 11505354-11508270
Chromosome . Primary Identifier  V Chromosome Location . Start  11505354
Chromosome Location . End  11508270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55A6.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008339 C55A6.10 C55A6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55A6.10a C55A6.10a 1644   V: 11505361-11505456

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.10a.1 11505354 11508270 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198757   103   V: 11505354-11505456 Caenorhabditis elegans
Exon198758   106   V: 11505507-11505612 Caenorhabditis elegans
Exon198760   119   V: 11505662-11505780 Caenorhabditis elegans
Exon198762   282   V: 11505827-11506108 Caenorhabditis elegans
Exon198764   214   V: 11506172-11506385 Caenorhabditis elegans
Exon198768   275   V: 11506877-11507151 Caenorhabditis elegans
Exon198770   336   V: 11507200-11507535 Caenorhabditis elegans
Exon198773   72   V: 11507615-11507686 Caenorhabditis elegans
Exon198777   344   V: 11507927-11508270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.10a.1 11505354 11508270 1

1 Sequence

Length
1851

1 Sequence Ontology Term

Identifier Name Description
transcript