WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55A6.6.1 Sequence Name  C55A6.6.1
Length (nt)  882   Chromosome Location  V: 11513711-11514737
Chromosome . Primary Identifier  V Chromosome Location . Start  11513711
Chromosome Location . End  11514737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55A6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008335 C55A6.6 C55A6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55A6.6 C55A6.6 753   V: 11513833-11513934

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.6.1 11513711 11514737 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198803   224   V: 11513711-11513934 Caenorhabditis elegans
Exon198804   354   V: 11513982-11514335 Caenorhabditis elegans
Exon198805   168   V: 11514387-11514554 Caenorhabditis elegans
Exon198806   136   V: 11514602-11514737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.6.1 11513711 11514737 -1

1 Sequence

Length
882

1 Sequence Ontology Term

Identifier Name Description
transcript