WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55A6.4.1 Sequence Name  C55A6.4.1
Length (nt)  1139   Chromosome Location  V: 11516445-11517889
Chromosome . Primary Identifier  V Chromosome Location . Start  11516445
Chromosome Location . End  11517889 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55A6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008333 C55A6.4 C55A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55A6.4 C55A6.4 753   V: 11516703-11516804

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.4.1 11516445 11517889 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198811   360   V: 11516445-11516804 Caenorhabditis elegans
Exon198812   354   V: 11516849-11517202 Caenorhabditis elegans
Exon198813   168   V: 11517411-11517578 Caenorhabditis elegans
Exon198814   257   V: 11517633-11517889 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.4.1 11516445 11517889 -1

1 Sequence

Length
1139

1 Sequence Ontology Term

Identifier Name Description
transcript