WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F38B7.1a Sequence Name  F38B7.1a
Length (nt)  1383   Chromosome Location  V: 11527957-11528045
Chromosome . Primary Identifier  V Chromosome Location . Start  11527957
Chromosome Location . End  11528045
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38B7.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31933 CCCH-1, isoform a 49.1 460 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001839
WBRNAi00046692
WBRNAi00046693
WBRNAi00014547
WBRNAi00031952
WBRNAi00107174

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F38B7.1a 11527957 11528045 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009532 ccch-1 F38B7.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F38B7.1a 11527957 11528045 1
CDS:F38B7.1a 11528131 11528200 1
CDS:F38B7.1a 11536056 11536261 1
CDS:F38B7.1a 11536593 11536696 1
CDS:F38B7.1a 11538932 11539247 1
CDS:F38B7.1a 11539345 11539631 1
CDS:F38B7.1a 11539735 11539849 1
CDS:F38B7.1a 11539902 11539981 1
CDS:F38B7.1a 11540069 11540184 1

1 Sequence

Length
1383

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38B7.1a.1 F38B7.1a.1 2496   V: 11527831-11541219