WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F38B7.5 Sequence Name  F38B7.5
Length (nt)  2634   Chromosome Location  V: 11554637-11554863
Chromosome . Primary Identifier  V Chromosome Location . Start  11554637
Chromosome Location . End  11554863
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38B7.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47600 DUO-1 100.2 877 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00094702
WBRNAi00000655
WBRNAi00046697
WBRNAi00014550
WBRNAi00072263
WBRNAi00073543
WBRNAi00073542
WBRNAi00072265
WBRNAi00072264
WBRNAi00076392
WBRNAi00031956
WBRNAi00073541
WBRNAi00073545
WBRNAi00073544
WBRNAi00061801
WBRNAi00073540
WBRNAi00073546

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F38B7.5 11554637 11554863 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001110 duo-1 F38B7.5 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F38B7.5 11554637 11554863 1
CDS:F38B7.5 11554918 11555009 1
CDS:F38B7.5 11555054 11555333 1
CDS:F38B7.5 11555530 11555739 1
CDS:F38B7.5 11555791 11556052 1
CDS:F38B7.5 11556101 11556378 1
CDS:F38B7.5 11556507 11556629 1
CDS:F38B7.5 11556681 11557097 1
CDS:F38B7.5 11557149 11557674 1
CDS:F38B7.5 11557720 11557938 1

1 Sequence

Length
2634

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38B7.5.1 F38B7.5.1 2830   V: 11554630-11558127