WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H12C20.3a Sequence Name  H12C20.3a
Length (nt)  1158   Chromosome Location  V: 11573460-11573539
Chromosome . Primary Identifier  V Chromosome Location . Start  11573460
Chromosome Location . End  11573539
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H12C20.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18808 NHR-68, isoform a 44.8 385 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00049367
WBRNAi00016239
WBRNAi00033696
WBRNAi00107538
WBRNAi00107415
WBRNAi00023509
WBRNAi00107494
WBRNAi00065582
WBRNAi00107101
WBRNAi00106876
WBRNAi00107599

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H12C20.3a 11573460 11573539 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003658 nhr-68 H12C20.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:H12C20.3a 11573460 11573539 1
CDS:H12C20.3a 11573584 11573904 1
CDS:H12C20.3a 11574091 11574202 1
CDS:H12C20.3a 11574254 11574391 1
CDS:H12C20.3a 11574792 11574922 1
CDS:H12C20.3a 11574969 11575090 1
CDS:H12C20.3a 11575138 11575252 1
CDS:H12C20.3a 11575416 11575554 1

1 Sequence

Length
1158

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H12C20.3a.1 H12C20.3a.1 1333   V: 11573440-11575709