WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F46F3.1a Sequence Name  F46F3.1a
Length (nt)  792   Chromosome Location  V: 11661776-11661886
Chromosome . Primary Identifier  V Chromosome Location . Start  11661776
Chromosome Location . End  11661886
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36695 CEH-27, isoform a 29.4 263 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00095626
WBRNAi00072514
WBRNAi00047543
WBRNAi00074395
WBRNAi00074399
WBRNAi00074398
WBRNAi00074400
WBRNAi00032373
WBRNAi00107551
WBRNAi00072515
WBRNAi00072516
WBRNAi00074394
WBRNAi00074397
WBRNAi00074396
WBRNAi00107117
WBRNAi00107066
WBRNAi00107312
WBRNAi00107297
WBRNAi00107287
WBRNAi00107500

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F46F3.1a 11661776 11661886 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000449 ceh-27 F46F3.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F46F3.1a 11661776 11661886 -1
CDS:F46F3.1a 11662207 11662464 -1
CDS:F46F3.1a 11662535 11662731 -1
CDS:F46F3.1a 11664168 11664235 -1
CDS:F46F3.1a 11664540 11664697 -1

1 Sequence

Length
792

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F46F3.1a.1 F46F3.1a.1 1056   V: 11661549-11665102
Transcript:F46F3.1a.2 F46F3.1a.2 1155   V: 11661549-11664892