WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05E10.4b.1 Sequence Name  W05E10.4b.1
Length (nt)  1968   Chromosome Location  V: 11709769-11715903
Chromosome . Primary Identifier  V Chromosome Location . Start  11709769
Chromosome Location . End  11715903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05E10.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006609 tre-3 W05E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05E10.4b W05E10.4b 1827   V: 11709838-11710035

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05E10.4b.1 11709769 11715903 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199389   267   V: 11709769-11710035 Caenorhabditis elegans
Exon199391   57   V: 11710085-11710141 Caenorhabditis elegans
Exon199397   75   V: 11712502-11712576 Caenorhabditis elegans
Exon199398   153   V: 11713574-11713726 Caenorhabditis elegans
Exon199399   297   V: 11713774-11714070 Caenorhabditis elegans
Exon199400   90   V: 11714120-11714209 Caenorhabditis elegans
Exon199401   649   V: 11714253-11714901 Caenorhabditis elegans
Exon199402   97   V: 11715120-11715216 Caenorhabditis elegans
Exon199403   101   V: 11715263-11715363 Caenorhabditis elegans
Exon199404   35   V: 11715409-11715443 Caenorhabditis elegans
Exon199405   147   V: 11715757-11715903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05E10.4b.1 11709769 11715903 -1

1 Sequence

Length
1968

1 Sequence Ontology Term

Identifier Name Description
transcript