WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05E10.4c.1 Sequence Name  W05E10.4c.1
Length (nt)  303   Chromosome Location  V: 11709838-11712549
Chromosome . Primary Identifier  V Chromosome Location . Start  11709838
Chromosome Location . End  11712549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05E10.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006609 tre-3 W05E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05E10.4c W05E10.4c 303   V: 11709838-11710035

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05E10.4c.1 11709838 11712549 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199390   198   V: 11709838-11710035 Caenorhabditis elegans
Exon199392   57   V: 11710085-11710141 Caenorhabditis elegans
Exon199396   48   V: 11712502-11712549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05E10.4c.1 11709838 11712549 -1

1 Sequence

Length
303

1 Sequence Ontology Term

Identifier Name Description
transcript