WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0240.3a.1 Sequence Name  B0240.3a.1
Length (nt)  4172   Chromosome Location  V: 11718102-11726071
Chromosome . Primary Identifier  V Chromosome Location . Start  11718102
Chromosome Location . End  11726071 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0240.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000907 daf-11 B0240.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0240.3a B0240.3a 3234   V: 11718672-11719112

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0240.3a.1 11718102 11726071 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199406   1011   V: 11718102-11719112 Caenorhabditis elegans
Exon199409   264   V: 11719971-11720234 Caenorhabditis elegans
Exon199412   105   V: 11720489-11720593 Caenorhabditis elegans
Exon199415   521   V: 11720769-11721289 Caenorhabditis elegans
Exon199418   180   V: 11721339-11721518 Caenorhabditis elegans
Exon199421   275   V: 11722065-11722339 Caenorhabditis elegans
Exon199424   98   V: 11722394-11722491 Caenorhabditis elegans
Exon199428   177   V: 11722543-11722719 Caenorhabditis elegans
Exon199430   91   V: 11723342-11723432 Caenorhabditis elegans
Exon199433   75   V: 11723478-11723552 Caenorhabditis elegans
Exon199436   193   V: 11723755-11723947 Caenorhabditis elegans
Exon199440   253   V: 11724250-11724502 Caenorhabditis elegans
Exon199442   185   V: 11724951-11725135 Caenorhabditis elegans
Exon199444   259   V: 11725178-11725436 Caenorhabditis elegans
Exon199446   95   V: 11725484-11725578 Caenorhabditis elegans
Exon199449   125   V: 11725631-11725755 Caenorhabditis elegans
Exon199450   265   V: 11725807-11726071 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0240.3a.1 11718102 11726071 -1

1 Sequence

Length
4172

1 Sequence Ontology Term

Identifier Name Description
transcript