WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:B0240.3c Sequence Name  B0240.3c
Length (nt)  3239   Chromosome Location  V: 11718672-11725652
Chromosome . Primary Identifier  V Chromosome Location . Start  11718672
Chromosome Location . End  11725652 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0240.3c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000907 daf-11 B0240.3 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0240.3c 11718672 11725652 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199408   441   V: 11718672-11719112 Caenorhabditis elegans
Exon199411   264   V: 11719971-11720234 Caenorhabditis elegans
Exon199414   105   V: 11720489-11720593 Caenorhabditis elegans
Exon199417   521   V: 11720769-11721289 Caenorhabditis elegans
Exon199420   180   V: 11721339-11721518 Caenorhabditis elegans
Exon199423   275   V: 11722065-11722339 Caenorhabditis elegans
Exon199426   98   V: 11722394-11722491 Caenorhabditis elegans
Exon199427   182   V: 11722538-11722719 Caenorhabditis elegans
Exon199432   91   V: 11723342-11723432 Caenorhabditis elegans
Exon199435   75   V: 11723478-11723552 Caenorhabditis elegans
Exon199438   193   V: 11723755-11723947 Caenorhabditis elegans
Exon199441   253   V: 11724250-11724502 Caenorhabditis elegans
Exon199443   185   V: 11724951-11725135 Caenorhabditis elegans
Exon199445   259   V: 11725178-11725436 Caenorhabditis elegans
Exon199447   95   V: 11725484-11725578 Caenorhabditis elegans
Exon199448   22   V: 11725631-11725652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0240.3c 11718672 11725652 -1

1 Sequence

Length
3239

1 Sequence Ontology Term

Identifier Name Description
transcript