WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0240.1.1 Sequence Name  B0240.1.1
Length (nt)  1455   Chromosome Location  V: 11727900-11730160
Chromosome . Primary Identifier  V Chromosome Location . Start  11727900
Chromosome Location . End  11730160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0240.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004359 rhr-2 B0240.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0240.1 B0240.1 1374   V: 11727980-11728042

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0240.1.1 11727900 11730160 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199451   143   V: 11727900-11728042 Caenorhabditis elegans
Exon199452   104   V: 11728232-11728335 Caenorhabditis elegans
Exon199453   134   V: 11728386-11728519 Caenorhabditis elegans
Exon199454   134   V: 11728719-11728852 Caenorhabditis elegans
Exon199455   95   V: 11728900-11728994 Caenorhabditis elegans
Exon199456   210   V: 11729042-11729251 Caenorhabditis elegans
Exon199457   145   V: 11729319-11729463 Caenorhabditis elegans
Exon199458   151   V: 11729511-11729661 Caenorhabditis elegans
Exon199459   131   V: 11729708-11729838 Caenorhabditis elegans
Exon199460   62   V: 11729905-11729966 Caenorhabditis elegans
Exon199461   146   V: 11730015-11730160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0240.1.1 11727900 11730160 -1

1 Sequence

Length
1455

1 Sequence Ontology Term

Identifier Name Description
transcript