WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0240.4.1 Sequence Name  B0240.4.1
Length (nt)  1965   Chromosome Location  V: 11731120-11733472
Chromosome . Primary Identifier  V Chromosome Location . Start  11731120
Chromosome Location . End  11733472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0240.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007118 npp-22 B0240.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0240.4 B0240.4 1767   V: 11731316-11731382

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0240.4.1 11731120 11733472 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199462   263   V: 11731120-11731382 Caenorhabditis elegans
Exon199463   101   V: 11731429-11731529 Caenorhabditis elegans
Exon199464   675   V: 11731633-11732307 Caenorhabditis elegans
Exon199465   258   V: 11732366-11732623 Caenorhabditis elegans
Exon199466   224   V: 11732672-11732895 Caenorhabditis elegans
Exon199467   105   V: 11732940-11733044 Caenorhabditis elegans
Exon199468   260   V: 11733092-11733351 Caenorhabditis elegans
Exon199469   79   V: 11733394-11733472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0240.4.1 11731120 11733472 -1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
transcript