WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04F3.1b.1 Sequence Name  T04F3.1b.1
Length (nt)  10182   Chromosome Location  V: 11740892-11754025
Chromosome . Primary Identifier  V Chromosome Location . Start  11740892
Chromosome Location . End  11754025 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04F3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011436 T04F3.1 T04F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04F3.1b T04F3.1b 10182   V: 11740892-11740948

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T04F3.1b.1 11740892 11754025 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199489   57   V: 11740892-11740948 Caenorhabditis elegans
Exon199492   270   V: 11741835-11742104 Caenorhabditis elegans
Exon199494   290   V: 11742149-11742438 Caenorhabditis elegans
Exon199496   1012   V: 11742636-11743647 Caenorhabditis elegans
Exon199498   300   V: 11743870-11744169 Caenorhabditis elegans
Exon199500   5823   V: 11744538-11750360 Caenorhabditis elegans
Exon199502   124   V: 11750459-11750582 Caenorhabditis elegans
Exon199504   388   V: 11750642-11751029 Caenorhabditis elegans
Exon199506   167   V: 11751100-11751266 Caenorhabditis elegans
Exon199508   347   V: 11751312-11751658 Caenorhabditis elegans
Exon199510   130   V: 11751707-11751836 Caenorhabditis elegans
Exon199512   375   V: 11752187-11752561 Caenorhabditis elegans
Exon199514   86   V: 11752608-11752693 Caenorhabditis elegans
Exon199516   454   V: 11752834-11753287 Caenorhabditis elegans
Exon199518   140   V: 11753369-11753508 Caenorhabditis elegans
Exon199519   219   V: 11753807-11754025 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T04F3.1b.1 11740892 11754025 1

1 Sequence

Length
10182

1 Sequence Ontology Term

Identifier Name Description
transcript