WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0240.2.1 Sequence Name  B0240.2.1
Length (nt)  2546   Chromosome Location  V: 11733540-11736996
Chromosome . Primary Identifier  V Chromosome Location . Start  11733540
Chromosome Location . End  11736996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0240.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007117 spe-42 B0240.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0240.2 B0240.2 2325   V: 11733733-11733821

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0240.2.1 11733540 11736996 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199525   282   V: 11733540-11733821 Caenorhabditis elegans
Exon199526   152   V: 11733865-11734016 Caenorhabditis elegans
Exon199527   116   V: 11734064-11734179 Caenorhabditis elegans
Exon199528   138   V: 11734437-11734574 Caenorhabditis elegans
Exon199529   261   V: 11734622-11734882 Caenorhabditis elegans
Exon199530   129   V: 11734938-11735066 Caenorhabditis elegans
Exon199531   144   V: 11735117-11735260 Caenorhabditis elegans
Exon199532   408   V: 11735317-11735724 Caenorhabditis elegans
Exon199533   190   V: 11735769-11735958 Caenorhabditis elegans
Exon199534   218   V: 11736031-11736248 Caenorhabditis elegans
Exon199535   93   V: 11736296-11736388 Caenorhabditis elegans
Exon199536   64   V: 11736439-11736502 Caenorhabditis elegans
Exon199537   105   V: 11736550-11736654 Caenorhabditis elegans
Exon199538   132   V: 11736706-11736837 Caenorhabditis elegans
Exon199539   114   V: 11736883-11736996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0240.2.1 11733540 11736996 -1

1 Sequence

Length
2546

1 Sequence Ontology Term

Identifier Name Description
transcript