WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04F3.2.1 Sequence Name  T04F3.2.1
Length (nt)  1067   Chromosome Location  V: 11757658-11758866
Chromosome . Primary Identifier  V Chromosome Location . Start  11757658
Chromosome Location . End  11758866 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04F3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011437 smoc-1 T04F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04F3.2 T04F3.2 783   V: 11757668-11757752

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04F3.2.1 11757658 11758866 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199524   95   V: 11757658-11757752 Caenorhabditis elegans
Exon199525   160   V: 11757802-11757961 Caenorhabditis elegans
Exon199526   467   V: 11758008-11758474 Caenorhabditis elegans
Exon199527   345   V: 11758522-11758866 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04F3.2.1 11757658 11758866 1

1 Sequence

Length
1067

1 Sequence Ontology Term

Identifier Name Description
transcript