WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55A11.4a Sequence Name  F55A11.4a
Length (nt)  1608   Chromosome Location  V: 11771255-11771324
Chromosome . Primary Identifier  V Chromosome Location . Start  11771255
Chromosome Location . End  11771324
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A11.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44090 F55A11.4, isoform a 60.1 535 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048410
WBRNAi00015677
WBRNAi00008147
WBRNAi00075881

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55A11.4a 11771255 11771324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010077 F55A11.4 F55A11.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55A11.4a 11771255 11771324 1
CDS:F55A11.4a 11771383 11771542 1
CDS:F55A11.4a 11771598 11772198 1
CDS:F55A11.4a 11772245 11772715 1
CDS:F55A11.4a 11772764 11772881 1
CDS:F55A11.4a 11772934 11773046 1
CDS:F55A11.4a 11773094 11773168 1

1 Sequence

Length
1608

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55A11.4a.3 F55A11.4a.3 1941   V: 11770467-11773495
Transcript:F55A11.4a.1 F55A11.4a.1 1931   V: 11770472-11773494
Transcript:F55A11.4a.2 F55A11.4a.2 1816   V: 11771248-11773495