WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A11.8a.1 Sequence Name  F55A11.8a.1
Length (nt)  748   Chromosome Location  V: 11788188-11789115
Chromosome . Primary Identifier  V Chromosome Location . Start  11788188
Chromosome Location . End  11789115 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A11.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010081 F55A11.8 F55A11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A11.8a F55A11.8a 672   V: 11788188-11788212

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55A11.8a.1 11788188 11789115 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199652   25   V: 11788188-11788212 Caenorhabditis elegans
Exon199653   98   V: 11788294-11788391 Caenorhabditis elegans
Exon199654   354   V: 11788436-11788789 Caenorhabditis elegans
Exon199657   271   V: 11788845-11789115 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55A11.8a.1 11788188 11789115 1

1 Sequence

Length
748

1 Sequence Ontology Term

Identifier Name Description
transcript